Transcript: ENST00000526680.1 LONRF1-002

Description

LON peptidase N-terminal domain and ring finger 1 [Source:HGNC Symbol;Acc:26302]

Gene Synonyms

FLJ23749, RNF191

Location

Chromosome 8: 12,579,415-12,600,752 reverse strand.

About this transcript

This transcript has 12 exons, is associated with 12014 variant alleles and maps to 477 oligo probes.

Gene

This transcript is a product of gene ENSG00000154359.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398246.3	LONRF1-001	3594	773aa	ENSP00000381298.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5987	E9PQH4 Q17RB8	NM_152271.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533751.1	LONRF1-003	3043	416aa	ENSP00000432130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQH4 Q17RB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524526.2	LONRF1-004	1246	376aa	ENSP00000433327.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQH4 H7C5V9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525024.1	LONRF1-008	841	199aa	ENSP00000436770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQH4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526680.1	LONRF1-002	2841	59aa	ENSP00000434090.1	Nonsense mediated decay		E9PRX6	-	-
ENST00000534446.1	LONRF1-006	679	59aa	ENSP00000451692.1	Nonsense mediated decay		E9PRX6	-	-
ENST00000530693.1	LONRF1-005	508	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527055.1	LONRF1-009	769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526610.1	LONRF1-007	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 3, Transcript length: 2,841 bps, Translation length: 59 residues

Version

ENST00000526680.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000384365 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000526680.1 LONRF1-002

Summary