Transcript: ENST00000413366.3 PRKCA-002

Description

protein kinase C, alpha [Source:HGNC Symbol;Acc:9393]

Gene Synonyms

AAG6, PKC-alpha, PKCA, PRKACA

Location

About this transcript

This transcript has 17 exons, is annotated with 38 domains and features, is associated with 214397 variant alleles and maps to 831 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000413366.3	PRKCA-002	8751	672aa	ENSP00000408695.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11664	L7RSM7 P17252	NM_002737.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000284384.6	PRKCA-003	2718	150aa	ENSP00000284384.6	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578063.1	PRKCA-001	1733	308aa	ENSP00000462087.1	Nonsense mediated decay		J3KRN5 Q7Z727	-	-
ENST00000583361.1	PRKCA-005	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000583775.1	PRKCA-004	321	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 8,751 bps, Translation length: 672 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P17252

CCDS

This transcript is a member of the Human CCDS set: CCDS11664

Version

ENST00000413366.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000446976 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.