Transcript: ENST00000491010.2 TBRG1-006

Description

transforming growth factor beta regulator 1 [Source:HGNC Symbol;Acc:29551]

Gene Synonyms

FLJ14621, NIAM, TB-5

Location

Chromosome 11: 124,496,695-124,502,339 forward strand.

About this transcript

This transcript has 2 exons, is associated with 2647 variant alleles and maps to 393 oligo probes.

Gene

This transcript is a product of gene ENSG00000154144.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000441174.3	TBRG1-001	4004	411aa	ENSP00000409016.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8448	Q3YBR2	NM_032811.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375005.4	TBRG1-201	1483	260aa	ENSP00000364144.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3YBR2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531667.1	TBRG1-011	552	112aa	ENSP00000435448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000284290.4	TBRG1-003	4461	160aa	ENSP00000284290.4	Nonsense mediated decay		F8W6N5 Q05BL0	-	-
ENST00000529543.1	TBRG1-005	2142	101aa	ENSP00000436599.1	Nonsense mediated decay		E9PI10	-	-
ENST00000530731.1	TBRG1-009	1571	160aa	ENSP00000436238.1	Nonsense mediated decay		F8W6N5 Q05BL0	-	-
ENST00000452080.1	TBRG1-004	730	156aa	ENSP00000395145.1	Nonsense mediated decay		E9PFP5	-	-
ENST00000438907.2	TBRG1-007	842	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491010.2	TBRG1-006	2308	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531033.1	TBRG1-008	1809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473629.2	TBRG1-002	1634	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,308 bps,

Version

ENST00000491010.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329062 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000491010.2 TBRG1-006

Summary