Transcript: ENST00000422003.2 TBCEL-001

Description

tubulin folding cofactor E-like [Source:HGNC Symbol;Acc:28115]

Gene Synonyms

El, LRRC35, MGC10233

Location

Chromosome 11: 120,894,830-120,961,484 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 25895 variant alleles and maps to 541 oligo probes.

Gene

This transcript is a product of gene ENSG00000154114.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000422003.2	TBCEL-001	5142	424aa	ENSP00000403925.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31692	E9PJJ0 E9PNS0 Q5QJ74	NM_152715.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524726.1	TBCEL-006	1913	238aa	ENSP00000432783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJJ0 E9PNS0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529397.1	TBCEL-005	1375	424aa	ENSP00000437184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31692	E9PJJ0 E9PNS0 Q5QJ74	NM_001130047.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533134.1	TBCEL-008	966	109aa	ENSP00000436419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PP54	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528512.1	TBCEL-004	553	83aa	ENSP00000431803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJJ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000284259.7	TBCEL-002	3923	118aa	ENSP00000284259.7	Nonsense mediated decay		E9PJJ0 G3V147	-	-
ENST00000531148.1	TBCEL-003	2593	101aa	ENSP00000433365.1	Nonsense mediated decay		B3KNB6 E9PJJ0	-	-
ENST00000533712.1	TBCEL-007	947	118aa	ENSP00000431156.1	Nonsense mediated decay		E9PJJ0 G3V147	-	-
ENST00000533169.1	TBCEL-009	1210	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530362.1	TBCEL-010	437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 5,142 bps, Translation length: 424 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5QJ74

CCDS

This transcript is a member of the Human CCDS set: CCDS31692

Version

ENST00000422003.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387657 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000422003.2 TBCEL-001

Summary