Transcript: ENST00000476121.1 GGPS1-004

Description

geranylgeranyl diphosphate synthase 1 [Source:HGNC Symbol;Acc:4249]

Gene Synonyms

GGPPS, GGPPS1

Location

Chromosome 1: 235,492,331-235,506,380 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 6643 variant alleles and maps to 449 oligo probes.

Gene

This transcript is a product of gene ENSG00000152904.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282841.5	GGPS1-001	2895	300aa	ENSP00000282841.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1604	A8MVQ8 C9J6G3 C9J7M1 O95749	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358966.2	GGPS1-201	2740	300aa	ENSP00000351852.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1604	A8MVQ8 C9J6G3 C9J7M1 O95749	NM_001037277.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476121.1	GGPS1-004	2703	300aa	ENSP00000420183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1604	A8MVQ8 C9J6G3 C9J7M1 O95749	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000391855.2	GGPS1-002	1407	246aa	ENSP00000375728.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVQ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488594.1	GGPS1-003	1396	300aa	ENSP00000418690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1604	A8MVQ8 C9J6G3 C9J7M1 O95749	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497327.1	GGPS1-008	868	230aa	ENSP00000417865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6G3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471812.1	GGPS1-005	850	242aa	ENSP00000417772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6G3 C9J7M1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489692.1	GGPS1-006	506	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482013.1	GGPS1-007	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,703 bps, Translation length: 300 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95749

CCDS

This transcript is a member of the Human CCDS set: CCDS1604

Version

ENST00000476121.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000356798 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000476121.1 GGPS1-004

Summary