Transcript: ENST00000356352.2 UPF2-001

Description

UPF2 regulator of nonsense transcripts homolog (yeast) [Source:HGNC Symbol;Acc:17854]

Gene Synonyms

DKFZP434D222, HUPF2, KIAA1408, RENT2, smg-3

Location

About this transcript

This transcript has 21 exons, is annotated with 26 domains and features, is associated with 52016 variant alleles and maps to 816 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356352.2	UPF2-001	5569	1272aa	ENSP00000348708.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7086	B4DHP3 Q9HAU5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397053.2	UPF2-201	5223	1272aa	ENSP00000380244.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7086	B4DHP3 Q9HAU5	NM_080599.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357604.5	UPF2-002	5193	1272aa	ENSP00000350221.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7086	B4DHP3 Q9HAU5	NM_015542.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460569.1	UPF2-004	640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 5,569 bps, Translation length: 1,272 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HAU5

CCDS

This transcript is a member of the Human CCDS set: CCDS7086

Version

ENST00000356352.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000046783 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.