Transcript: ENST00000402939.2 MAGI1-001

Description

membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:946]

Gene Synonyms

AIP-3, AIP3, BAIAP1, BAP-1, BAP1, MAGI-1, RP11-88H12.2, TNRC19, WWP3

Location

Chromosome 3: 65,342,053-66,023,983 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 56 domains and features, is associated with 327948 variant alleles and maps to 782 oligo probes.

Gene

This transcript is a product of gene ENSG00000151276.19 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330909.8	MAGI1-002	7415	1287aa	ENSP00000331157.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33781	Q96QZ7	NM_015520.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483466.1	MAGI1-003	4791	1256aa	ENSP00000420323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2904	Q96QZ7	NM_004742.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402939.2	MAGI1-001	4389	1462aa	ENSP00000385450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33780	Q96QZ7	NM_001033057.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463103.2	MAGI1-010	4193	1131aa	ENSP00000418177.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4U7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460329.2	MAGI1-008	3694	1136aa	ENSP00000418862.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000497477.2	MAGI1-007	3555	1160aa	ENSP00000424369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96QZ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472257.1	MAGI1-004	3045	1014aa	ENSP00000420796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5T8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000479287.1	MAGI1-015	556	185aa	ENSP00000418044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4S7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000470990.1	MAGI1-005	2138	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476403.1	MAGI1-012	622	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496734.1	MAGI1-013	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480729.1	MAGI1-017	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464060.1	MAGI1-006	2247	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468159.1	MAGI1-011	972	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476703.1	MAGI1-014	834	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494271.1	MAGI1-016	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,389 bps, Translation length: 1,462 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96QZ7

CCDS

This transcript is a member of the Human CCDS set: CCDS33780

Version

ENST00000402939.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000349126 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000402939.2 MAGI1-001

Summary