Transcript: ENST00000382142.3 MTMR12-001

Description

myotubularin related protein 12 [Source:HGNC Symbol;Acc:18191]

Gene Synonyms

3-PAP, 3PAP, FLJ20476, KIAA1682, PIP3AP

Location

About this transcript

This transcript has 16 exons, is annotated with 12 domains and features, is associated with 36769 variant alleles and maps to 642 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382142.3	MTMR12-001	5187	747aa	ENSP00000371577.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34138	Q9C0I1	NM_001040446.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000280285.5	MTMR12-003	4966	693aa	ENSP00000280285.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0I1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264934.5	MTMR12-002	2215	637aa	ENSP00000264934.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0I1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505419.1	MTMR12-004	671	38aa	ENSP00000426028.1	Nonsense mediated decay		D6RHK0	-	-
ENST00000513622.1	MTMR12-005	561	39aa	ENSP00000426912.1	Nonsense mediated decay		D6RE76	-	-
ENST00000510216.1	MTMR12-007	444	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504049.1	MTMR12-006	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 5,187 bps, Translation length: 747 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9C0I1

CCDS

This transcript is a member of the Human CCDS set: CCDS34138

Version

ENST00000382142.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000366579 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.