Transcript: ENST00000540554.1 FERMT3-003

Description

fermitin family member 3 [Source:HGNC Symbol;Acc:23151]

Gene Synonyms

KIND3, MGC10966, MIG-2, MIG2B, UNC112C, URP2, URP2SF

Location

Chromosome 11: 63,988,307-63,990,592 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1220 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSG00000149781.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000279227.5	FERMT3-001	2489	667aa	ENSP00000279227.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8060	F5H1C6 F5H3I6 Q86UX7	NM_178443.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345728.5	FERMT3-002	2477	663aa	ENSP00000339950.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8059	F5H1C6 F5H3I6 Q86UX7	NM_031471.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544997.1	FERMT3-009	1006	286aa	ENSP00000445778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1C6 F5H3I6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000545896.1	FERMT3-004	911	184aa	ENSP00000440209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YFT5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000541252.1	FERMT3-008	714	81aa	ENSP00000438885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3I6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541326.1	FERMT3-006	890	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540957.1	FERMT3-005	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546255.1	FERMT3-007	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540554.1	FERMT3-003	379	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 379 bps,

Version

ENST00000540554.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000396301 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000540554.1 FERMT3-003

Summary