Transcript: ENST00000533291.1 GRIK4-002

Description

glutamate receptor, ionotropic, kainate 4 [Source:HGNC Symbol;Acc:4582]

Gene Synonyms

EAA1, GRIK, GluK4, KA1

Location

About this transcript

This transcript has 18 exons, is associated with 167739 variant alleles and maps to 584 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000527524.2	GRIK4-001	5802	956aa	ENSP00000435648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8433	Q16099	NM_001282470.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438375.2	GRIK4-003	4214	956aa	ENSP00000404063.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8433	Q16099	NM_014619.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527130.1	GRIK4-006	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526536.1	GRIK4-004	508	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533291.1	GRIK4-002	2961	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530172.1	GRIK4-007	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 0, Transcript length: 2,961 bps,

Version

ENST00000533291.1

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387796 (version 1)