Transcript: ENST00000397821.3 SH3KBP1-001

Description

SH3-domain kinase binding protein 1 [Source:HGNC Symbol;Acc:13867]

Gene Synonyms

CD2BP3, CIN85, GIG10, HSB-1, HSB1, MIG18

Location

Chromosome X: 19,552,093-19,905,719 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 35 domains and features, is associated with 105535 variant alleles and maps to 759 oligo probes.

Gene

This transcript is a product of gene ENSG00000147010.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397821.3	SH3KBP1-001	4731	665aa	ENSP00000380921.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14193	B7Z6E8 Q5JPT6 Q96B97	NM_031892.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379716.1	SH3KBP1-008	3819	427aa	ENSP00000369039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55383	B7Z6E8 Q96B97	NM_001184960.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379698.4	SH3KBP1-003	2678	628aa	ENSP00000369020.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35213	B7Z6E8 Q96B97	NM_001024666.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379697.3	SH3KBP1-002	1944	553aa	ENSP00000369019.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VSN0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379726.3	SH3KBP1-004	1941	645aa	ENSP00000369049.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z6E8 Q5JPT2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000541422.1	SH3KBP1-201	1549	404aa	ENSP00000442499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z6E8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432234.1	SH3KBP1-005	663	208aa	ENSP00000388766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JPT1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431164.1	SH3KBP1-006	518	149aa	ENSP00000409292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JPT3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477102.1	SH3KBP1-007	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494961.1	SH3KBP1-009	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 4,731 bps, Translation length: 665 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96B97

CCDS

This transcript is a member of the Human CCDS set: CCDS14193

Version

ENST00000397821.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055992 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397821.3 SH3KBP1-001

Summary