Transcript: ENST00000522226.1 TNIP1-001

Description

TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:16903]

Gene Synonyms

ABIN-1, KIAA0113, NAF1, VAN, nip40-1

Location

Chromosome 5: 150,410,053-150,467,221 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 15 domains and features, is associated with 24580 variant alleles and maps to 574 oligo probes.

Gene

This transcript is a product of gene ENSG00000145901.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389378.2	TNIP1-201	3268	636aa	ENSP00000374029.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34280	A4F1W8 A4F1X2 B7Z5B0 E7EW15 E7EW68 E7EWG2 Q15025	NM_006058.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315050.7	TNIP1-002	2785	636aa	ENSP00000317891.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34280	A4F1W8 A4F1X2 B7Z5B0 E7EW15 E7EW68 E7EWG2 Q15025	NM_001252391.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523338.1	TNIP1-003	2711	635aa	ENSP00000428243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58985	A4F1W9 A4F1X2 E7EW15 E7EW68 E7EWG2 Q15025	NM_001252392.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520931.1	TNIP1-006	2680	583aa	ENSP00000429891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58982	A4F1X2 E7EW15 Q15025	NM_001252386.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521591.1	TNIP1-004	2274	636aa	ENSP00000430760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34280	A4F1W8 A4F1X2 B7Z5B0 E7EW15 E7EW68 E7EWG2 Q15025	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522226.1	TNIP1-001	2238	636aa	ENSP00000428187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34280	A4F1W8 A4F1X2 B7Z5B0 E7EW15 E7EW68 E7EWG2 Q15025	NM_001252390.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518977.1	TNIP1-005	2200	635aa	ENSP00000430971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58985	A4F1W9 A4F1X2 E7EW15 E7EW68 E7EWG2 Q15025	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523200.1	TNIP1-007	1743	572aa	ENSP00000431105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58984	A4F1X2 A4F1X4 E7ET96 E7EW15 E7EW68 E7EWG2	NM_001258455.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524280.1	TNIP1-008	1716	556aa	ENSP00000429912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58983	A4F1X2 A4F1X5 E7EPY1 E7EW15 E7EW68 E7EWG2	NM_001258456.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522100.1	TNIP1-010	877	257aa	ENSP00000428487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4F1X2 E7EW15	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520695.1	TNIP1-012	658	143aa	ENSP00000430279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4F1X2 E7EW68 E7EWG2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521001.1	TNIP1-011	575	133aa	ENSP00000428404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4F1X2 E7EWG2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517504.1	TNIP1-018	562	146aa	ENSP00000430739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YC17	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519339.1	TNIP1-009	1815	492aa	ENSP00000427854.1	Nonsense mediated decay		A4F1X2 E7EMV7 E7EW15	-	-
ENST00000521423.1	TNIP1-014	926	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522926.1	TNIP1-013	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522574.1	TNIP1-017	1394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000517329.1	TNIP1-015	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521782.1	TNIP1-016	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,238 bps, Translation length: 636 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15025

CCDS

This transcript is a member of the Human CCDS set: CCDS34280

Version

ENST00000522226.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000374912 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000522226.1 TNIP1-001

Summary