Transcript: ENST00000512711.1 PDGFC-005

Description

platelet derived growth factor C [Source:HGNC Symbol;Acc:8801]

Gene Synonyms

FALLOTEIN, SCDGF, fallotein

Location

Chromosome 4: 157,693,941-157,795,124 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 45609 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000145431.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000502773.1	PDGFC-001	4165	345aa	ENSP00000422464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3795	Q9NRA1	NM_016205.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541126.1	PDGFC-201	1354	182aa	ENSP00000442943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NRA1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542208.1	PDGFC-202	1014	190aa	ENSP00000439728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E3A5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422544.2	PDGFC-009	849	282aa	ENSP00000410048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NRA1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274071.2	PDGFC-002	2987	50aa	ENSP00000274071.2	Nonsense mediated decay		J3KN71	-	-
ENST00000506880.1	PDGFC-003	1014	53aa	ENSP00000424600.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504672.1	PDGFC-007	786	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511985.1	PDGFC-008	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513664.1	PDGFC-004	597	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510982.1	PDGFC-006	524	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512711.1	PDGFC-005	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 522 bps,

Version

ENST00000512711.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366127 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000512711.1 PDGFC-005

Summary