Transcript: ENST00000341900.6 DLX1-002

Description

distal-less homeobox 1 [Source:HGNC Symbol;Acc:2914]

Location

Chromosome 2: 172,950,264-172,954,405 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 2205 variant alleles and maps to 339 oligo probes.

Gene

This transcript is a product of gene ENSG00000144355.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361725.4	DLX1-001	2640	255aa	ENSP00000354478.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2247	F8VXJ2 J3KP55 P56177 Q53SU3	NM_178120.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341900.6	DLX1-002	2130	129aa	ENSP00000341786.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33328	P56177	NM_001038493.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361609.4	DLX1-006	1022	171aa	ENSP00000354865.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KP55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000469444.2	DLX1-004	762	187aa	ENSP00000448827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VXJ2 J3KP55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550686.1	DLX1-007	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475989.2	DLX1-003	1897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000409492.1	DLX1-005	919	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,130 bps, Translation length: 129 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P56177

CCDS

This transcript is a member of the Human CCDS set: CCDS33328

Version

ENST00000341900.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000156955 (version 2)

Annotation Attributes

retained intron first [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000341900.6 DLX1-002

Summary