Transcript: ENST00000409087.3 ST6GAL2-002

Description

ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 [Source:HGNC Symbol;Acc:10861]

Gene Synonyms

KIAA1877, SIAT2, ST6GalII, St6GalII, St6gal2

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 32364 variant alleles and maps to 235 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409382.3	ST6GAL2-003	7275	529aa	ENSP00000386942.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2073	C4N9P8 C9JIK2 Q96JF0	NM_001142351.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361686.4	ST6GAL2-001	6857	529aa	ENSP00000355273.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2073	C4N9P8 C9JIK2 Q96JF0	NM_032528.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409087.3	ST6GAL2-002	1657	466aa	ENSP00000387332.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46380	C4N9P8 C9JIK2 Q96JF0	NM_001142352.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361803.3	ST6GAL2-005	574	95aa	ENSP00000355386.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000419159.2	ST6GAL2-004	308	34aa	ENSP00000395581.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIK2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,657 bps, Translation length: 466 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96JF0

CCDS

This transcript is a member of the Human CCDS set: CCDS46380

Version

ENST00000409087.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000330064 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.