Transcript: ENST00000272249.3 HNRNPLL-005

Description

heterogeneous nuclear ribonucleoprotein L-like [Source:HGNC Symbol;Acc:25127]

Gene Synonyms

HNRPLL, SRRF

Location

Chromosome 2: 38,790,650-38,818,783 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 13 domains and features, is associated with 13694 variant alleles and maps to 641 oligo probes.

Gene

This transcript is a product of gene ENSG00000143889.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000449105.3	HNRNPLL-001	4173	542aa	ENSP00000390625.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1796	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409636.1	HNRNPLL-002	3980	537aa	ENSP00000387088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46261	Q8WVV9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000608859.1	HNRNPLL-203	3035	542aa	ENSP00000476852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6W592	NM_138394.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378915.3	HNRNPLL-202	2523	508aa	ENSP00000368195.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7WPG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409328.1	HNRNPLL-010	1908	508aa	ENSP00000386575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JB52	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410076.1	HNRNPLL-004	1687	275aa	ENSP00000386695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8WVV9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358367.4	HNRNPLL-201	1259	282aa	ENSP00000351136.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IYN3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425682.1	HNRNPLL-007	570	149aa	ENSP00000396669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441689.1	HNRNPLL-008	512	133aa	ENSP00000415766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000272249.3	HNRNPLL-005	2190	217aa	ENSP00000272249.3	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000498516.1	HNRNPLL-003	655	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488099.1	HNRNPLL-006	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 6, Transcript length: 2,190 bps, Translation length: 217 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000272249.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000331165 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000272249.3 HNRNPLL-005

Summary