Transcript: ENST00000323699.4 DEGS1-001

Description

delta(4)-desaturase, sphingolipid 1 [Source:HGNC Symbol;Acc:13709]

Gene Synonyms

DEGS, DEGS-1, DES1, Des-1, FADS7, MLD

Location

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 5214 variant alleles and maps to 404 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323699.4	DEGS1-001	2101	323aa	ENSP00000316476.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1540	O15121	NM_003676.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000391877.3	DEGS1-201	1345	323aa	ENSP00000375749.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1540	O15121	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415210.1	DEGS1-004	957	261aa	ENSP00000400545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMA0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465848.1	DEGS1-003	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498813.1	DEGS1-002	358	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,101 bps, Translation length: 323 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15121

CCDS

This transcript is a member of the Human CCDS set: CCDS1540

Version

ENST00000323699.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000091285 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.