Transcript: ENST00000270747.3 ARHGEF19-001

Description

Rho guanine nucleotide exchange factor (GEF) 19 [Source:HGNC Symbol;Acc:26604]

Gene Synonyms

FLJ33962, WGEF

Location

About this transcript

This transcript has 16 exons, is annotated with 18 domains and features, is associated with 7153 variant alleles and maps to 578 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000270747.3	ARHGEF19-001	3029	802aa	ENSP00000270747.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS170	Q8IW93	NM_153213.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449495.1	ARHGEF19-004	921	307aa	ENSP00000391145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TEV0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000441785.1	ARHGEF19-007	582	167aa	ENSP00000414370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TEV0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478117.1	ARHGEF19-005	2035	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478210.1	ARHGEF19-003	685	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471928.1	ARHGEF19-006	653	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 3,029 bps, Translation length: 802 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IW93

CCDS

This transcript is a member of the Human CCDS set: CCDS170

Version

ENST00000270747.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000006289 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.