Transcript: ENST00000584672.1 CSNK1D-027

Description

casein kinase 1, delta [Source:HGNC Symbol;Acc:2452]

Gene Synonyms

ASPS, CKID, CKIdelta, FASPS2, HCKID

Location

Chromosome 17: 80,196,899-80,206,856 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 6044 variant alleles and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSG00000141551.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314028.6	CSNK1D-001	3712	415aa	ENSP00000324464.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11805	P48730	NM_001893.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392334.2	CSNK1D-002	2047	409aa	ENSP00000376146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11806	B4DIJ9 P48730	NM_139062.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398519.5	CSNK1D-006	1580	427aa	ENSP00000381531.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BYT1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580446.1	CSNK1D-015	612	187aa	ENSP00000463757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQI9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000269361.7	CSNK1D-022	1088	120aa	ENSP00000269361.7	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580784.1	CSNK1D-010	1081	20aa	ENSP00000463906.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000403276.3	CSNK1D-005	1040	126aa	ENSP00000385769.3	Nonsense mediated decay		B4DLF1	-	-
ENST00000581660.1	CSNK1D-013	611	43aa	ENSP00000464551.1	Nonsense mediated decay		J3QS70	-	-
ENST00000585026.1	CSNK1D-017	563	56aa	ENSP00000462144.1	Nonsense mediated decay		J3KRS6	-	-
ENST00000584672.1	CSNK1D-027	401	64aa	ENSP00000462079.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578904.1	CSNK1D-009	1269	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582844.1	CSNK1D-021	957	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577578.1	CSNK1D-028	928	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584472.1	CSNK1D-012	586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578194.1	CSNK1D-019	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000580565.1	CSNK1D-024	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581655.1	CSNK1D-018	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584913.1	CSNK1D-029	295	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581241.1	CSNK1D-007	6094	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584377.1	CSNK1D-008	2891	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578501.1	CSNK1D-025	1124	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000579316.1	CSNK1D-014	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581737.1	CSNK1D-026	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581108.1	CSNK1D-023	607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000579308.1	CSNK1D-016	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000580061.1	CSNK1D-020	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 401 bps, Translation length: 64 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000584672.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000442629 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000584672.1 CSNK1D-027

Summary