Transcript: ENST00000584709.1 SKAP1-003

Description

src kinase associated phosphoprotein 1 [Source:HGNC Symbol;Acc:15605]

Gene Synonyms

HEL-S-81p, SCAP1, SKAP55

Location

Chromosome 17: 46,210,807-46,507,637 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 4 domains and features, is associated with 109819 variant alleles and maps to 495 oligo probes.

Gene

This transcript is a product of gene ENSG00000141293.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336915.6	SKAP1-001	1534	359aa	ENSP00000338171.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32674	J3QRG3 J3QS38 Q86WV1	NM_003726.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584924.1	SKAP1-002	1477	359aa	ENSP00000464311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32674	J3QRG3 J3QS38 Q86WV1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579336.1	SKAP1-005	678	99aa	ENSP00000464198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRG3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584709.1	SKAP1-003	1687	103aa	ENSP00000463284.1	Nonsense mediated decay		J3QKX8	-	-
ENST00000581400.2	SKAP1-006	783	92aa	ENSP00000462360.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000581419.1	SKAP1-004	696	38aa	ENSP00000462437.1	Nonsense mediated decay		J3KSD4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000583844.1	SKAP1-008	563	32aa	ENSP00000464509.1	Nonsense mediated decay		J3QS38	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000579476.1	SKAP1-007	682	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 5, Transcript length: 1,687 bps, Translation length: 103 residues

Version

ENST00000584709.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000443433 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000584709.1 SKAP1-003

Summary