Transcript: ENST00000344273.2 PCSK6-202

Description

proprotein convertase subtilisin/kexin type 6 [Source:HGNC Symbol;Acc:8569]

Gene Synonyms

PACE4, SPC4

Location

Chromosome 15: 101,886,947-102,029,873 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 18 domains and features, is associated with 66980 variant alleles and maps to 407 oligo probes.

Gene

This transcript is a product of gene ENSG00000140479.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000348070.1	PCSK6-203	4236	968aa	ENSP00000305056.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RQD9 P29122	NM_138320.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358417.3	PCSK6-204	4197	955aa	ENSP00000351193.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RQD9 E7EM82	NM_138321.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398185.2	PCSK6-008	3723	797aa	ENSP00000381246.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0Y3Q0 Q59H04	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000398181.2	PCSK6-205	3205	622aa	ENSP00000381243.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RQD9 E7EWH5	NM_138325.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344273.2	PCSK6-202	2937	651aa	ENSP00000344410.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RQD9 E7EQ62	NM_138324.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000331826.7	PCSK6-201	1497	498aa	ENSP00000332052.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H7BXT3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559417.1	PCSK6-010	1035	345aa	ENSP00000452997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000558951.1	PCSK6-012	543	125aa	ENSP00000453771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0YMW5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558864.1	PCSK6-011	397	77aa	ENSP00000452839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559605.1	PCSK6-017	379	126aa	ENSP00000453155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000561177.1	PCSK6-001	4407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000560921.1	PCSK6-005	4267	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000561109.1	PCSK6-003	3130	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000559678.1	PCSK6-004	3091	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000558716.1	PCSK6-002	2965	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000560271.1	PCSK6-019	2919	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000561444.1	PCSK6-016	2196	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000557794.1	PCSK6-009	1196	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000558433.1	PCSK6-015	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000560902.1	PCSK6-018	501	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000559430.1	PCSK6-013	338	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000559499.1	PCSK6-006	3325	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000558154.1	PCSK6-007	852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000560785.1	PCSK6-014	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,937 bps, Translation length: 651 residues

Version

ENST00000344273.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 1.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000344273.2 PCSK6-202

Summary