Transcript: ENST00000472508.1 GTF2A2-004

Description

general transcription factor IIA, 2, 12kDa [Source:HGNC Symbol;Acc:4647]

Gene Synonyms

HsT18745, TF2A2, TFIIA

Location

Chromosome 15: 59,944,499-59,949,682 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2666 variant alleles and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSG00000140307.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396060.2	GTF2A2-001	1582	109aa	ENSP00000379372.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10173	P52657	NM_004492.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396063.1	GTF2A2-003	970	109aa	ENSP00000379375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10173	P52657	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396061.1	GTF2A2-008	758	109aa	ENSP00000379373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10173	P52657	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396064.3	GTF2A2-006	633	68aa	ENSP00000379376.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MYR4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484743.1	GTF2A2-007	408	74aa	ENSP00000418574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559706.1	GTF2A2-009	382	72aa	ENSP00000452648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000267869.4	GTF2A2-005	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559141.1	GTF2A2-010	293	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472508.1	GTF2A2-004	202	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480768.1	GTF2A2-002	1278	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 202 bps,

Version

ENST00000472508.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316669 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000472508.1 GTF2A2-004

Summary