Transcript: ENST00000510624.1 LEF1-018

Description

lymphoid enhancer-binding factor 1 [Source:HGNC Symbol;Acc:6551]

Gene Synonyms

LEF-1, TCF10, TCF1ALPHA, TCF7L3

Location

Chromosome 4: 108,969,795-109,087,877 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 47727 variant alleles and maps to 377 oligo probes.

Gene

This transcript is a product of gene ENSG00000138795.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379951.2	LEF1-201	3477	386aa	ENSP00000369284.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47122	Q8IZI3 Q9UJU2	NM_001130714.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265165.1	LEF1-001	3068	399aa	ENSP00000265165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3679	Q659G9 Q8IZI3 Q9UJU2	NM_016269.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438313.2	LEF1-020	1488	371aa	ENSP00000406176.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47123	B4DZY5 Q659G9 Q8IZI3 Q9UJU2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510624.1	LEF1-018	1472	303aa	ENSP00000422840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54791	B4DZY5 D6RIV1 Q659G9 Q9UJU2	NM_001166119.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515500.1	LEF1-003	1037	173aa	ENSP00000422801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAB1 D6RIV1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512172.1	LEF1-006	598	145aa	ENSP00000427365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIV1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506680.1	LEF1-019	1280	329aa	ENSP00000422334.1	Nonsense mediated decay		Q8IZI3 Q9UJU2	-	-
ENST00000504950.1	LEF1-007	572	133aa	ENSP00000427459.1	Nonsense mediated decay		D6RID7	-	-
ENST00000503879.1	LEF1-017	1492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504426.1	LEF1-013	1479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510135.1	LEF1-005	1376	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509428.1	LEF1-009	1090	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505379.1	LEF1-010	1084	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514444.1	LEF1-012	916	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505297.1	LEF1-011	873	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504775.1	LEF1-008	860	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510717.1	LEF1-004	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512407.1	LEF1-014	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505293.1	LEF1-002	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507470.1	LEF1-016	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505328.1	LEF1-015	527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,472 bps, Translation length: 303 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UJU2

CCDS

This transcript is a member of the Human CCDS set: CCDS54791

Version

ENST00000510624.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000363838 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000510624.1 LEF1-018

Summary