Transcript: ENST00000264893.6 SEPT11-001

Description

septin 11 [Source:HGNC Symbol;Acc:25589]

Gene Synonyms

FLJ10849

Location

Chromosome 4: 77,870,856-77,959,767 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 33959 variant alleles and maps to 919 oligo probes.

Gene

This transcript is a product of gene ENSG00000138758.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264893.6	SEPT11-001	5593	429aa	ENSP00000264893.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34018	Q9NVA2	NM_018243.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541121.1	SEPT11-201	5422	439aa	ENSP00000443701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9Y6 D6RDP1 D6RDU5 Q9NVA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502584.1	SEPT11-006	2615	425aa	ENSP00000426344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGI3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505788.1	SEPT11-002	2079	432aa	ENSP00000424925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RER5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510515.1	SEPT11-004	1886	439aa	ENSP00000422896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9Y6 D6RDP1 D6RDU5 Q9NVA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510641.1	SEPT11-005	1870	372aa	ENSP00000420839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDU5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506731.1	SEPT11-015	659	160aa	ENSP00000423103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512778.1	SEPT11-009	610	136aa	ENSP00000422047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9Y6 D6RDP1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504637.1	SEPT11-008	548	126aa	ENSP00000425262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDP1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502401.1	SEPT11-012	276	82aa	ENSP00000424122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9G8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512575.1	SEPT11-010	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512333.1	SEPT11-011	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504460.1	SEPT11-016	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513373.1	SEPT11-013	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515671.1	SEPT11-014	507	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513697.1	SEPT11-007	328	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506047.1	SEPT11-003	1382	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 5,593 bps, Translation length: 429 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NVA2

CCDS

This transcript is a member of the Human CCDS set: CCDS34018

Version

ENST00000264893.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000362676 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000264893.6 SEPT11-001

Summary