Transcript: ENST00000456523.3 FGF5-002

Description

fibroblast growth factor 5 [Source:HGNC Symbol;Acc:3683]

Gene Synonyms

HBGF-5, Smag-82

Location

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 10889 variant alleles and maps to 533 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312465.7	FGF5-001	4555	268aa	ENSP00000311697.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34021	P12034 Q8NBG6 Q8NF90	NM_004464.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456523.3	FGF5-002	5234	123aa	ENSP00000398353.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3586	P12034	NM_033143.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507780.1	FGF5-005	658	119aa	ENSP00000423903.1	Nonsense mediated decay		H0Y9E2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503413.1	FGF5-004	3042	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000380628.3	FGF5-003	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 5,234 bps, Translation length: 123 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P12034

CCDS

This transcript is a member of the Human CCDS set: CCDS3586

Version

ENST00000456523.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252628 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.