Transcript: ENST00000542403.2 PAK6-004

Description

p21 protein (Cdc42/Rac)-activated kinase 6 [Source:HGNC Symbol;Acc:16061]

Gene Synonyms

PAK5

Location

Chromosome 15: 40,545,385-40,569,688 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 15 domains and features, is associated with 11793 variant alleles and maps to 313 oligo probes.

Gene

This transcript is a product of gene ENSG00000137843.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000455577.2	PAK6-002	4215	636aa	ENSP00000409465.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61590	G5E9R2 H0YK74 H0YK91 H0YL16 H0YLZ9 H0YM99 H0YMS4	NM_001276718.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560346.1	PAK6-003	4020	681aa	ENSP00000453858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10054	H0YK74 H0YK91 H0YL16 H0YLZ9 H0YM99 H0YMS4 Q9NQU5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441369.1	PAK6-201	3878	681aa	ENSP00000406873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10054	H0YK74 H0YK91 H0YL16 H0YLZ9 H0YM99 H0YMS4 Q9NQU5	NM_001128628.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000260404.4	PAK6-001	3865	681aa	ENSP00000260404.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10054	H0YK74 H0YK91 H0YL16 H0YLZ9 H0YM99 H0YMS4 Q9NQU5	NM_020168.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453867.1	PAK6-202	3795	681aa	ENSP00000401153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10054	H0YK74 H0YK91 H0YL16 H0YLZ9 H0YM99 H0YMS4 Q9NQU5	NM_001128629.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542403.2	PAK6-004	2540	681aa	ENSP00000439597.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10054	H0YK74 H0YK91 H0YL16 H0YLZ9 H0YM99 H0YMS4 Q9NQU5	NM_001276717.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560669.1	PAK6-014	1146	284aa	ENSP00000453021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK74 H0YK91 H0YL16 H0YLZ9 H0YM99 H0YMS4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561230.1	PAK6-005	891	104aa	ENSP00000453520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YM99	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559617.1	PAK6-010	598	112aa	ENSP00000452708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK74 H0YK91 H0YM99	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559139.1	PAK6-013	571	109aa	ENSP00000452686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK74 H0YM99	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560684.1	PAK6-012	569	71aa	ENSP00000453057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKB6 H0YL02 H0YL47	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558055.1	PAK6-006	565	122aa	ENSP00000453407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK74 H0YK91 H0YLZ9 H0YM99	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560806.1	PAK6-009	561	20aa	ENSP00000453005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YL02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558106.1	PAK6-011	560	123aa	ENSP00000453721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK74 H0YK91 H0YLZ9 H0YM99 H0YMS4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558878.1	PAK6-007	553	57aa	ENSP00000452737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKB6 H0YL02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558183.1	PAK6-008	552	74aa	ENSP00000452647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK38 H0YKB6 H0YL02 H0YL47	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559901.1	PAK6-015	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557926.1	PAK6-017	517	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557808.1	PAK6-016	805	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,540 bps, Translation length: 681 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQU5

CCDS

This transcript is a member of the Human CCDS set: CCDS10054

Version

ENST00000542403.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000418355 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000542403.2 PAK6-004

Summary