Transcript: ENST00000260276.3 C11orf1-001

Description

chromosome 11 open reading frame 1 [Source:HGNC Symbol;Acc:1163]

Gene Synonyms

FLJ23499

Location

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 3221 variant alleles and maps to 356 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260276.3	C11orf1-001	2885	150aa	ENSP00000260276.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8350	E9PLN1 Q9H5F2	NM_022761.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529270.1	C11orf1-002	1437	190aa	ENSP00000431180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLN1 E9PMC1 E9PS33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530214.1	C11orf1-005	599	121aa	ENSP00000435864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528125.1	C11orf1-003	534	104aa	ENSP00000433224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLN1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530799.1	C11orf1-004	509	142aa	ENSP00000432128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS33	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,885 bps, Translation length: 150 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H5F2

CCDS

This transcript is a member of the Human CCDS set: CCDS8350

Version

ENST00000260276.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000391650 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.