Transcript: ENST00000374212.4 SLC31A1-001

Description

solute carrier family 31 (copper transporter), member 1 [Source:HGNC Symbol;Acc:11016]

Gene Synonyms

COPT1, CTR1, hCTR1

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 16971 variant alleles and maps to 529 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374212.4	SLC31A1-001	4744	190aa	ENSP00000363329.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6789	O15431 Q9BT69	NM_001859.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374210.6	SLC31A1-201	753	188aa	ENSP00000363327.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T1M3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496650.1	SLC31A1-003	475	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 4,744 bps, Translation length: 190 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15431

CCDS

This transcript is a member of the Human CCDS set: CCDS6789

Version

ENST00000374212.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000053715 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.