Transcript: ENST00000471643.1 RALGPS1-004

Description

Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:16851]

Gene Synonyms

KIAA0351, RALGEF2, RALGPS1A

Location

Chromosome 9: 129,974,955-129,979,623 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1915 variant alleles and maps to 192 oligo probes.

Gene

This transcript is a product of gene ENSG00000136828.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000259351.5	RALGPS1-001	6336	557aa	ENSP00000259351.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35143	Q5JS13	NM_014636.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438723.1	RALGPS1-005	4858	153aa	ENSP00000404021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000373434.1	RALGPS1-002	2466	529aa	ENSP00000362533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55346	Q5JS13	NM_001190728.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424082.2	RALGPS1-201	2362	537aa	ENSP00000415630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55345	Q5JS13	NM_001190729.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394022.3	RALGPS1-006	1672	384aa	ENSP00000377590.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JS13	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373436.1	RALGPS1-007	1667	305aa	ENSP00000362535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55344	Q5JS13	NM_001190730.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394011.3	RALGPS1-012	819	108aa	ENSP00000377579.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JS13	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319107.4	RALGPS1-009	770	173aa	ENSP00000317149.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JT61	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480993.1	RALGPS1-013	869	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472427.1	RALGPS1-010	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471643.1	RALGPS1-004	681	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477700.1	RALGPS1-011	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467325.2	RALGPS1-003	330	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000373439.2	RALGPS1-008	1527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 681 bps,

Version

ENST00000471643.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054136 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000471643.1 RALGPS1-004

Summary