Transcript: ENST00000604420.1 ODF2-017

Description

outer dense fiber of sperm tails 2 [Source:HGNC Symbol;Acc:8114]

Gene Synonyms

CT134, ODF2/1, ODF2/2, ODF84

Location

Chromosome 9: 131,218,431-131,262,762 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 9 domains and features, is associated with 20846 variant alleles and maps to 677 oligo probes.

Gene

This transcript is a product of gene ENSG00000136811.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434106.3	ODF2-011	3890	829aa	ENSP00000403453.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56588	Q5BJF6 Q5T4C7 Q6PJQ8 Q9UNM2 S4R462	NM_153433.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393527.3	ODF2-005	3653	805aa	ENSP00000377161.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6PJQ8 Q9UNM2	NM_002540.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351030.3	ODF2-201	3406	824aa	ENSP00000342581.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56590	Q5BJF6 Q6PJQ8 Q9UNM2	NM_153435.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000604420.1	ODF2-017	3030	829aa	ENSP00000473949.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56588	Q5T4C7 Q6PJQ8 Q9UNM2 S4R462	NM_001242353.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372807.5	ODF2-009	2475	824aa	ENSP00000361893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56590	Q5BJF6 Q6PJQ8 Q9UNM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444119.2	ODF2-002	2418	805aa	ENSP00000394506.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5BJF6 Q6PJQ8 Q9UNM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372791.3	ODF2-006	2375	638aa	ENSP00000361877.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6902	Q5BJF6 Q5T4C8 Q9UNM2	NM_153437.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372814.3	ODF2-008	2249	701aa	ENSP00000361901.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56586	Q5BJF6 Q9UNM2	NM_153439.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546203.1	ODF2-019	2140	638aa	ENSP00000437579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56587	Q5BJF6 Q9UNM2	NM_153440.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393533.2	ODF2-018	2086	657aa	ENSP00000377166.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56585	Q5BJF6 Q9UNM2	NM_153436.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448249.3	ODF2-004	2059	576aa	ENSP00000396687.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56589	Q5BJF6 Q9UNM2	NM_001242354.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421776.2	ODF2-020	1254	386aa	ENSP00000395489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T4C3 Q9UNM2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535026.1	ODF2-202	937	147aa	ENSP00000443178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5S3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432065.2	ODF2-012	934	205aa	ENSP00000407852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T4C6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446274.1	ODF2-003	822	156aa	ENSP00000415290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T4C8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000483070.2	ODF2-015	723	241aa	ENSP00000474651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3R9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000470061.1	ODF2-007	588	100aa	ENSP00000475118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R462	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497812.2	ODF2-014	578	144aa	ENSP00000474949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R411	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488909.1	ODF2-016	1525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469582.2	ODF2-001	1054	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000444993.2	ODF2-010	1007	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 3,030 bps, Translation length: 829 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS56588

Version

ENST00000604420.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000470079 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000604420.1 ODF2-017

Summary