Transcript: ENST00000508540.1 CHAD-001

Description

chondroadherin [Source:HGNC Symbol;Acc:1909]

Gene Synonyms

SLRR4A

Location

About this transcript

This transcript has 4 exons, is annotated with 34 domains and features, is associated with 2348 variant alleles and maps to 332 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000508540.1	CHAD-001	1789	359aa	ENSP00000423812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11568	O15335	NM_001267.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000258969.4	CHAD-002	1739	359aa	ENSP00000258969.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11568	O15335	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506187.1	CHAD-005	594	42aa	ENSP00000425672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,789 bps, Translation length: 359 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15335

CCDS

This transcript is a member of the Human CCDS set: CCDS11568

Version

ENST00000508540.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000367447 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.