Transcript: ENST00000401630.3 IL6-005

Description

interleukin 6 (interferon, beta 2) [Source:HGNC Symbol;Acc:6018]

Gene Synonyms

BSF2, HGF, HSF, IFNB2, IL-6

Location

Chromosome 7: 22,766,843-22,771,348 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 2291 variant alleles and maps to 293 oligo probes.

Gene

This transcript is a product of gene ENSG00000136244.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000404625.1	IL6-001	1527	212aa	ENSP00000385675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5375	B5MC21 C9J5B0 H9C875 P05231 Q75MH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420258.2	IL6-202	1493	252aa	ENSP00000405994.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNQ5 B4DNV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000258743.5	IL6-201	1170	212aa	ENSP00000258743.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5375	B5MC21 C9J5B0 H9C875 P05231 Q75MH2	NM_000600.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407492.1	IL6-004	926	136aa	ENSP00000385043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC21	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401630.3	IL6-005	765	189aa	ENSP00000384928.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC21 B5MCZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406575.1	IL6-006	649	198aa	ENSP00000385227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNV3 B5MC14 C9J5B0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426291.1	IL6-002	574	152aa	ENSP00000405150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J5B0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000401651.1	IL6-003	539	122aa	ENSP00000385718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485300.1	IL6-008	985	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464710.1	IL6-007	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 765 bps, Translation length: 189 residues

Version

ENST00000401630.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000320076 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000401630.3 IL6-005

Summary