Transcript: ENST00000357063.3 LMO7-201

Description

LIM domain 7 [Source:HGNC Symbol;Acc:6646]

Gene Synonyms

FBX20, FBXO20, KIAA0858, LOMP

Location

Chromosome 13: 76,194,570-76,434,004 forward strand.

About this transcript

This transcript has 31 exons, is annotated with 29 domains and features, is associated with 105474 variant alleles and maps to 939 oligo probes.

Gene

This transcript is a product of gene ENSG00000136153.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357063.3	LMO7-201	8128	1670aa	ENSP00000349571.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLH4 E9PRJ0 J3KP06	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377534.3	LMO7-202	8025	1614aa	ENSP00000366757.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRJ0 F8WD26	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341547.4	LMO7-001	7233	1349aa	ENSP00000342112.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9454	E9PK58 E9PLU6 Q8WWI1	NM_005358.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000321797.8	LMO7-005	5647	1398aa	ENSP00000317802.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMT2 E9PRJ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465261.2	LMO7-002	5580	1385aa	ENSP00000433352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53876	E9PLH4 E9PRJ0	NM_015842.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526202.1	LMO7-012	4121	1275aa	ENSP00000431129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ10 E9PMS6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377499.5	LMO7-004	3472	1045aa	ENSP00000366719.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK58 E9PLU6 E9PMP7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447038.1	LMO7-003	3165	1055aa	ENSP00000388955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRE3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000497947.2	LMO7-006	995	121aa	ENSP00000431271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524651.1	LMO7-021	914	305aa	ENSP00000433591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000525914.1	LMO7-020	874	292aa	ENSP00000434083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000525373.1	LMO7-025	672	191aa	ENSP00000431896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ10	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526371.1	LMO7-022	650	165aa	ENSP00000432269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRJ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489941.2	LMO7-024	597	165aa	ENSP00000431636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK58 E9PLU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534657.1	LMO7-017	589	12aa	ENSP00000434943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533809.2	LMO7-015	578	99aa	ENSP00000475811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526528.1	LMO7-023	572	141aa	ENSP00000434201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRE3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525107.2	LMO7-016	536	179aa	ENSP00000435296.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000605961.1	LMO7-026	2039	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485987.1	LMO7-008	1087	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533305.1	LMO7-014	720	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465309.2	LMO7-007	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482116.1	LMO7-009	935	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533299.1	LMO7-013	623	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532785.1	LMO7-018	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532377.1	LMO7-019	595	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467686.1	LMO7-010	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 31, Coding exons: 31, Transcript length: 8,128 bps, Translation length: 1,670 residues

Version

ENST00000357063.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000357063.3 LMO7-201

Summary