Transcript: ENST00000378654.3 SUCLA2-001

Description

succinate-CoA ligase, ADP-forming, beta subunit [Source:HGNC Symbol;Acc:11448]

Gene Synonyms

A-BETA, MTDPS5, SCS-betaA

Location

Chromosome 13: 48,516,791-48,575,462 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 15 domains and features, is associated with 25689 variant alleles and maps to 505 oligo probes.

Gene

This transcript is a product of gene ENSG00000136143.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378654.3	SUCLA2-001	2164	463aa	ENSP00000367923.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9406	E5KS60 F5GXC8 F5H5G8 Q9P2R7 Q9Y4T0	NM_003850.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544100.1	SUCLA2-203	1890	329aa	ENSP00000443412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5G8 Q9Y4T0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543413.1	SUCLA2-202	1801	405aa	ENSP00000441056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXC8 F5H5G8 Q9Y4T0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534875.1	SUCLA2-201	1471	405aa	ENSP00000438182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXC8 F5H5G8 Q9Y4T0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434484.1	SUCLA2-010	894	298aa	ENSP00000392771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T9Q5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000433022.1	SUCLA2-009	467	154aa	ENSP00000415091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T9Q8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497202.1	SUCLA2-003	863	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470760.1	SUCLA2-004	809	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467222.1	SUCLA2-005	710	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493152.1	SUCLA2-007	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481279.2	SUCLA2-006	466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484941.1	SUCLA2-008	372	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,164 bps, Translation length: 463 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P2R7

CCDS

This transcript is a member of the Human CCDS set: CCDS9406

Version

ENST00000378654.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044852 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000378654.3 SUCLA2-001

Summary