Transcript: ENST00000541852.1 ITM2C-010

Description

integral membrane protein 2C [Source:HGNC Symbol;Acc:6175]

Gene Synonyms

BRI3, BRICD2C, E25, E25C, ITM3, hRPC.1050_D_4

Location

Chromosome 2: 231,729,369-231,741,682 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 6238 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSG00000135916.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326427.6	ITM2C-001	2078	267aa	ENSP00000322730.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2479	B8ZZM6 C9JG41 E7EUS6 F5H4I5 Q9NQX7	NM_030926.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335005.6	ITM2C-002	1889	220aa	ENSP00000335121.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33396	Q9NQX7	NM_001012514.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326407.6	ITM2C-006	1888	230aa	ENSP00000322100.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33395	Q9NQX7	NM_001012516.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409704.2	ITM2C-008	1106	205aa	ENSP00000387242.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZM6 E7EUS6 F5H4I5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457215.1	ITM2C-004	763	180aa	ENSP00000390655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543957.1	ITM2C-007	573	122aa	ENSP00000444899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4I5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541852.1	ITM2C-010	572	125aa	ENSP00000440295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUS6 F5H4I5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418408.2	ITM2C-009	563	125aa	ENSP00000403257.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUS6 F5H4I5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492029.1	ITM2C-005	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 572 bps, Translation length: 125 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000541852.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397047 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000541852.1 ITM2C-010

Summary