Transcript: ENST00000392102.1 TTLL4-001

Description

tubulin tyrosine ligase-like family, member 4 [Source:HGNC Symbol;Acc:28976]

Gene Synonyms

KIAA0173

Location

Chromosome 2: 219,575,598-219,620,139 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 11 domains and features, is associated with 19353 variant alleles and maps to 780 oligo probes.

Gene

This transcript is a product of gene ENSG00000135912.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392102.1	TTLL4-001	4967	1199aa	ENSP00000375951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2422	C9J3I1 C9J982 C9JB60 Q14679	NM_014640.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000258398.4	TTLL4-201	4730	1199aa	ENSP00000258398.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2422	C9J3I1 C9J982 C9JB60 Q14679	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442769.1	TTLL4-003	3971	1135aa	ENSP00000396555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3I1 C9J982 C9JB60 E7EX20	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457313.1	TTLL4-002	3723	973aa	ENSP00000393332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PH58	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437755.1	TTLL4-007	747	174aa	ENSP00000391342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3I1 C9J982 C9JB60	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000436668.1	TTLL4-015	738	246aa	ENSP00000415845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000415717.1	TTLL4-006	712	101aa	ENSP00000411228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J982 C9JB60	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417855.1	TTLL4-016	601	162aa	ENSP00000400068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000424644.1	TTLL4-008	588	100aa	ENSP00000405485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JB60	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448224.1	TTLL4-020	583	194aa	ENSP00000392103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000417196.1	TTLL4-018	811	179aa	ENSP00000415197.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000434241.1	TTLL4-019	476	100aa	ENSP00000407434.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480929.1	TTLL4-004	2421	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465558.1	TTLL4-005	1688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467841.1	TTLL4-011	973	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494428.1	TTLL4-010	829	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480472.1	TTLL4-012	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461181.1	TTLL4-009	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491899.1	TTLL4-014	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475950.1	TTLL4-013	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472527.1	TTLL4-017	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 18, Transcript length: 4,967 bps, Translation length: 1,199 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14679

CCDS

This transcript is a member of the Human CCDS set: CCDS2422

Version

ENST00000392102.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000256726 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000392102.1 TTLL4-001

Summary