Transcript: ENST00000529597.1 REPS1-013

Description

RALBP1 associated Eps domain containing 1 [Source:HGNC Symbol;Acc:15578]

Gene Synonyms

RALBP1

Location

Chromosome 6: 139,225,998-139,308,777 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 18 domains and features, is associated with 34817 variant alleles and maps to 562 oligo probes.

Gene

This transcript is a product of gene ENSG00000135597.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000450536.2	REPS1-001	4537	796aa	ENSP00000392065.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69213	Q96D71	NM_001286611.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000258062.5	REPS1-003	3161	795aa	ENSP00000258062.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5193	Q96D71	NM_031922.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367663.4	REPS1-005	2607	769aa	ENSP00000356635.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47488	J3KP76	NM_001128617.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409812.2	REPS1-002	2511	705aa	ENSP00000386699.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69212	Q96D71	NM_001286612.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529597.1	REPS1-013	2468	754aa	ENSP00000434251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YDT0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000415951.2	REPS1-015	2424	737aa	ENSP00000397941.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMG1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478483.2	REPS1-009	619	152aa	ENSP00000432157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530255.1	REPS1-018	439	146aa	ENSP00000435131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YE73	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000526022.1	REPS1-020	299	61aa	ENSP00000435236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483468.1	REPS1-007	6069	220aa	ENSP00000435392.1	Nonsense mediated decay		F2Z3L2	-	-
ENST00000445570.1	REPS1-011	2690	220aa	ENSP00000401729.1	Nonsense mediated decay		F2Z3L2	-	-
ENST00000431346.2	REPS1-006	838	147aa	ENSP00000402609.2	Nonsense mediated decay		H7C1V2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000414243.1	REPS1-010	578	102aa	ENSP00000403740.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530575.1	REPS1-017	523	121aa	ENSP00000431474.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000531675.1	REPS1-016	353	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484164.2	REPS1-004	1312	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492787.2	REPS1-012	795	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530370.1	REPS1-019	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529423.1	REPS1-014	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526244.1	REPS1-021	311	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,468 bps, Translation length: 754 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000529597.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395685 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000529597.1 REPS1-013

Summary