Transcript: ENST00000400163.2 COL4A2-004

Description

collagen, type IV, alpha 2 [Source:HGNC Symbol;Acc:2203]

Gene Synonyms

DKFZp686I14213, FLJ22259, ICH, POREN2

Location

Chromosome 13: 110,958,159-111,077,215 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 55262 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSG00000134871.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360467.5	COL4A2-001	6281	1712aa	ENSP00000353654.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41907	A2A352 P08572	NM_001846.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400163.2	COL4A2-004	491	105aa	ENSP00000383027.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A352	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462309.1	COL4A2-006	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483683.1	COL4A2-008	686	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463084.1	COL4A2-003	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480771.1	COL4A2-005	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480609.1	COL4A2-009	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494852.1	COL4A2-002	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478681.1	COL4A2-007	337	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 491 bps, Translation length: 105 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000400163.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000312857 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000400163.2 COL4A2-004

Summary