Transcript: ENST00000334889.3 RAX-001

Description

retina and anterior neural fold homeobox [Source:HGNC Symbol;Acc:18662]

Gene Synonyms

MCOP3, RX

Location

About this transcript

This transcript has 3 exons, is annotated with 14 domains and features, is associated with 3698 variant alleles and maps to 277 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334889.3	RAX-001	3197	346aa	ENSP00000334813.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11972	G3V2C8 Q9Y2V3	NM_013435.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000256852.7	RAX-002	2935	104aa	ENSP00000256852.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2C8 Q86V11	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555288.1	RAX-003	473	74aa	ENSP00000450583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2C8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000591550.1	RAX-004	503	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,197 bps, Translation length: 346 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2V3

CCDS

This transcript is a member of the Human CCDS set: CCDS11972

Version

ENST00000334889.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256128 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.