Transcript: ENST00000256443.3 CDK7-001

Description

cyclin-dependent kinase 7 [Source:HGNC Symbol;Acc:1778]

Gene Synonyms

CAK, CAK1, CDKN7, HCAK, MO15, STK1, p39MO15

Location

Chromosome 5: 68,530,700-68,573,250 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 18371 variant alleles and maps to 554 oligo probes.

Gene

This transcript is a product of gene ENSG00000134058.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000502604.1	CDK7-003	1455	253aa	ENSP00000422121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9G1 D6REC6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000256443.3	CDK7-001	1432	346aa	ENSP00000256443.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3999	D6R9G1 D6REC6 P50613	NM_001799.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514676.1	CDK7-004	1164	309aa	ENSP00000422737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAD4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506563.1	CDK7-005	728	149aa	ENSP00000425043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510106.1	CDK7-011	818	43aa	ENSP00000426561.1	Nonsense mediated decay		D6RFL0	-	-
ENST00000515391.1	CDK7-006	809	77aa	ENSP00000425893.1	Nonsense mediated decay		D6RIG9	-	-
ENST00000504147.1	CDK7-009	722	58aa	ENSP00000422027.1	Nonsense mediated decay		D6R9Z2	-	-
ENST00000508726.1	CDK7-013	531	69aa	ENSP00000421559.1	Nonsense mediated decay		D6RF14	-	-
ENST00000515180.1	CDK7-007	486	55aa	ENSP00000426372.1	Nonsense mediated decay		D6RGG9	-	-
ENST00000506789.1	CDK7-010	477	58aa	ENSP00000425983.1	Nonsense mediated decay		D6RI01	-	-
ENST00000513629.1	CDK7-012	885	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512687.1	CDK7-002	905	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512985.1	CDK7-008	261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,432 bps, Translation length: 346 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50613

CCDS

This transcript is a member of the Human CCDS set: CCDS3999

Version

ENST00000256443.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000216802 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000256443.3 CDK7-001

Summary