Transcript: ENST00000533661.1 SBF2-003

Description

SET binding factor 2 [Source:HGNC Symbol;Acc:2135]

Gene Synonyms

CMT4B2, DENND7B, KIAA1766, MTMR13

Location

Chromosome 11: 10,038,015-10,064,537 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 10930 variant alleles and maps to 84 oligo probes.

Gene

This transcript is a product of gene ENSG00000133812.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256190.8	SBF2-001	7439	1849aa	ENSP00000256190.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31427	H0YDZ1 Q86WG5	NM_030962.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420722.2	SBF2-008	1188	396aa	ENSP00000410478.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000530741.1	SBF2-009	993	331aa	ENSP00000432643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000532095.1	SBF2-015	587	132aa	ENSP00000434620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YDZ1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000527019.1	SBF2-007	978	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525697.1	SBF2-013	923	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524961.1	SBF2-011	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526353.1	SBF2-004	5665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533770.1	SBF2-002	4829	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525040.1	SBF2-006	2117	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533661.1	SBF2-003	999	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533584.1	SBF2-010	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528478.1	SBF2-012	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529587.1	SBF2-014	404	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 999 bps,

Version

ENST00000533661.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000386925 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000533661.1 SBF2-003

Summary