Transcript: ENST00000398454.1 SPINK5-002

Description

serine peptidase inhibitor, Kazal type 5 [Source:HGNC Symbol;Acc:15464]

Gene Synonyms

DKFZp686K19184, FLJ21544, FLJ97536, FLJ97596, FLJ99794, LEKTI, LETKI, NETS, NS, VAKTI

Location

Chromosome 5: 147,443,535-147,504,503 forward strand.

About this transcript

This transcript has 28 exons, is annotated with 81 domains and features, is associated with 25365 variant alleles and maps to 647 oligo probes.

Gene

This transcript is a product of gene ENSG00000133710.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359874.3	SPINK5-003	3656	1094aa	ENSP00000352936.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47300	Q9NQ38	NM_001127698.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000256084.7	SPINK5-001	3535	1064aa	ENSP00000256084.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43382	Q9NQ38	NM_006846.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398454.1	SPINK5-002	2915	916aa	ENSP00000381472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47301	Q9NQ38	NM_001127699.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508733.1	SPINK5-008	2674	869aa	ENSP00000421519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG22 E7EWP9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521206.1	SPINK5-011	492	68aa	ENSP00000430264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG22	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476697.3	SPINK5-012	1073	201aa	ENSP00000427943.1	Nonsense mediated decay		E5RFU9	-	-
ENST00000476608.1	SPINK5-006	810	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481286.1	SPINK5-005	465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507988.1	SPINK5-009	2408	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 2,915 bps, Translation length: 916 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQ38

CCDS

This transcript is a member of the Human CCDS set: CCDS47301

Version

ENST00000398454.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000259216 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000398454.1 SPINK5-002

Summary