Transcript: ENST00000488717.1 TRPC4-005

Description

transient receptor potential cation channel, subfamily C, member 4 [Source:HGNC Symbol;Acc:12336]

Gene Synonyms

HTRP-4, HTRP4, TRP4

Location

Chromosome 13: 38,210,980-38,357,470 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 64333 variant alleles and maps to 492 oligo probes.

Gene

This transcript is a product of gene ENSG00000133107.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379705.3	TRPC4-001	4059	977aa	ENSP00000369027.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9365	Q9UBN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379681.3	TRPC4-202	3446	982aa	ENSP00000369003.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45037	Q9UBN4	NM_016179.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447043.1	TRPC4-204	3369	836aa	ENSP00000414316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UBN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358477.2	TRPC4-003	2955	893aa	ENSP00000351264.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45038	Q9UBN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338947.5	TRPC4-201	2912	804aa	ENSP00000342580.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45035	Q9UBN4	NM_001135958.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355779.2	TRPC4-002	2784	836aa	ENSP00000348025.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45039	Q9UBN4	NM_001135957.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379673.2	TRPC4-004	2760	828aa	ENSP00000368995.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45036	Q9UBN4	NM_001135956.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426868.2	TRPC4-203	2709	460aa	ENSP00000410133.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3MHB9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379679.1	TRPC4-006	2475	804aa	ENSP00000369001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45035	Q9UBN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488717.1	TRPC4-005	2657	323aa	ENSP00000435969.1	Nonsense mediated decay		Q9UBN4	-	-
ENST00000494529.1	TRPC4-007	440	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 3, Transcript length: 2,657 bps, Translation length: 323 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBN4

Version

ENST00000488717.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044580 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000488717.1 TRPC4-005

Summary