Transcript: ENST00000470195.2 HSD17B7-011

Description

hydroxysteroid (17-beta) dehydrogenase 7 [Source:HGNC Symbol;Acc:5215]

Gene Synonyms

PRAP, SDR37C1

Location

Chromosome 1: 162,769,622-162,782,316 forward strand.

About this transcript

This transcript has 5 exons, is associated with 5148 variant alleles and maps to 403 oligo probes.

Gene

This transcript is a product of gene ENSG00000132196.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367917.3	HSD17B7-201	1386	306aa	ENSP00000356894.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P56937	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000254521.3	HSD17B7-001	1190	341aa	ENSP00000254521.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1242	P56937	NM_016371.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367913.1	HSD17B7-007	666	111aa	ENSP00000356889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T248	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367915.1	HSD17B7-005	507	84aa	ENSP00000356892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T249	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466176.1	HSD17B7-006	650	109aa	ENSP00000436334.1	Nonsense mediated decay		F2Z2C2	-	-
ENST00000470195.2	HSD17B7-011	593	62aa	ENSP00000476930.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485405.1	HSD17B7-002	2541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463037.1	HSD17B7-004	859	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484251.1	HSD17B7-008	712	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488656.1	HSD17B7-010	671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494450.1	HSD17B7-009	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 593 bps, Translation length: 62 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000470195.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000097926 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000470195.2 HSD17B7-011

Summary