Transcript: ENST00000554715.1 LGALS3-003

Description

lectin, galactoside-binding, soluble, 3 [Source:HGNC Symbol;Acc:6563]

Gene Synonyms

CBP35, GAL3, GALBP, GALIG, L31, LGALS2, MAC-2, MAC2

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 6049 variant alleles and maps to 216 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254301.9	LGALS3-001	1146	250aa	ENSP00000254301.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41956	G3V407 P17931 Q86TY5 Q8IXB9	NM_002306.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554715.1	LGALS3-003	916	233aa	ENSP00000451381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3R6 G3V407 Q8IXB9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553493.1	LGALS3-008	319	88aa	ENSP00000451526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V407	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553755.1	LGALS3-007	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556322.1	LGALS3-004	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556263.1	LGALS3-005	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556438.2	LGALS3-002	1729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 916 bps, Translation length: 233 residues

Version

ENST00000554715.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411311 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.