Transcript: ENST00000505548.1 UBE2D2-002

Description

ubiquitin-conjugating enzyme E2D 2 [Source:HGNC Symbol;Acc:12475]

Gene Synonyms

E2(17)KB2, PUBC1, UBC4, UBC4/5, UBC5B, UBCH4, UBCH5B, UbcH5B

Location

Chromosome 5: 138,941,614-139,006,700 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 29279 variant alleles and maps to 418 oligo probes.

Gene

This transcript is a product of gene ENSG00000131508.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253815.2	UBE2D2-201	2864	118aa	ENSP00000253815.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47275	D6RAW0 D6RFM0 P62837	NM_181838.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398733.3	UBE2D2-001	2702	147aa	ENSP00000381717.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43369	D6RAW0 D6RFM0 P62837	NM_003339.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505007.1	UBE2D2-003	1170	98aa	ENSP00000426523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAW0 D6RFM0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505548.1	UBE2D2-002	1113	118aa	ENSP00000424941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47275	D6RAW0 D6RFM0 P62837	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511725.1	UBE2D2-006	656	118aa	ENSP00000429613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47275	D6RAW0 D6RFM0 P62837	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398734.4	UBE2D2-004	901	147aa	ENSP00000381718.4	Nonsense mediated decay	CCDS43369	D6RAW0 D6RFM0 P62837	-	-
ENST00000511691.1	UBE2D2-008	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510470.1	UBE2D2-007	256	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,113 bps, Translation length: 118 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62837

CCDS

This transcript is a member of the Human CCDS set: CCDS47275

Version

ENST00000505548.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372455 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000505548.1 UBE2D2-002

Summary