Transcript: ENST00000560463.1 TRAF3-006

Description

TNF receptor-associated factor 3 [Source:HGNC Symbol;Acc:12033]

Gene Synonyms

CAP-1, CAP1, CD40bp, CRAF1, IIAE5, LAP1

Location

Chromosome 14: 103,243,955-103,338,290 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 42600 variant alleles and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSG00000131323.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000560371.1	TRAF3-001	7640	568aa	ENSP00000454207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9975	H0YMI8 Q13114	NM_145725.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347662.4	TRAF3-201	2492	543aa	ENSP00000328003.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9976	A6NHG8 H0YMI8	NM_145726.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392745.2	TRAF3-005	2459	568aa	ENSP00000376500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9975	H0YMI8 Q13114	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351691.5	TRAF3-004	2239	543aa	ENSP00000332468.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9976	A6NHG8 H0YMI8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539721.1	TRAF3-002	1786	485aa	ENSP00000445998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55946	H0YMI8 Q13114	NM_001199427.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559734.1	TRAF3-008	870	290aa	ENSP00000453032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YL26	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000560463.1	TRAF3-006	701	94aa	ENSP00000453623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558700.1	TRAF3-007	738	207aa	ENSP00000453031.1	Nonsense mediated decay		H0YL25	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558880.1	TRAF3-009	374	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 701 bps, Translation length: 94 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000560463.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415738 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000560463.1 TRAF3-006

Summary