Transcript: ENST00000252485.4 PVRL2-001

Description

poliovirus receptor-related 2 (herpesvirus entry mediator B) [Source:HGNC Symbol;Acc:9707]

Gene Synonyms

CD112, HVEB, PRR2, PVRR2

Location

Chromosome 19: 45,349,432-45,382,198 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 23 domains and features, is associated with 14936 variant alleles and maps to 385 oligo probes.

Gene

This transcript is a product of gene ENSG00000130202.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252483.5	PVRL2-002	2466	538aa	ENSP00000252483.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42576	Q7Z456 Q7Z457 Q7Z458 Q92692	NM_001042724.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000252485.4	PVRL2-001	2112	479aa	ENSP00000252485.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12645	Q7Z457 Q7Z458 Q92692 Q9UEI6	NM_002856.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591581.1	PVRL2-003	950	210aa	ENSP00000465587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z457	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592018.1	PVRL2-005	812	54aa	ENSP00000468305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585601.1	PVRL2-006	650	56aa	ENSP00000465511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK87	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587386.1	PVRL2-004	452	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,112 bps, Translation length: 479 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92692

CCDS

This transcript is a member of the Human CCDS set: CCDS12645

Version

ENST00000252485.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000453230 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000252485.4 PVRL2-001

Summary