Transcript: ENST00000249750.4 ALDH1A2-001

Description

aldehyde dehydrogenase 1 family, member A2 [Source:HGNC Symbol;Acc:15472]

Gene Synonyms

RALDH(II), RALDH2, RALDH2-T

Location

Chromosome 15: 58,245,622-58,358,616 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 8 domains and features, is associated with 60290 variant alleles and maps to 641 oligo probes.

Gene

This transcript is a product of gene ENSG00000128918.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000249750.4	ALDH1A2-001	4098	518aa	ENSP00000249750.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10163	H0YKL3 O94788 Q9UED3	NM_003888.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347587.3	ALDH1A2-002	3297	480aa	ENSP00000309623.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10164	H0YKL3 O94788 Q9UED3	NM_170696.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537372.1	ALDH1A2-201	3049	497aa	ENSP00000438296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55968	H0YKL3 O94788 Q9UED3	NM_001206897.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558231.1	ALDH1A2-016	1664	489aa	ENSP00000453600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKL3 H0YMG7 Q9UED3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559517.1	ALDH1A2-017	1468	422aa	ENSP00000453408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45266	H0YKL3 O94788 Q9UED3	NM_170697.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558239.1	ALDH1A2-003	664	25aa	ENSP00000453292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UED3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557967.1	ALDH1A2-024	577	9aa	ENSP00000454028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561070.1	ALDH1A2-021	554	85aa	ENSP00000452850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKL3 Q9UED3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430119.2	ALDH1A2-015	3049	40aa	ENSP00000416754.2	Nonsense mediated decay		E9PF31	-	-
ENST00000558384.1	ALDH1A2-023	466	24aa	ENSP00000453734.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559579.1	ALDH1A2-009	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560863.1	ALDH1A2-004	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558073.1	ALDH1A2-011	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558946.1	ALDH1A2-005	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558524.1	ALDH1A2-013	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560122.1	ALDH1A2-010	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559266.1	ALDH1A2-020	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559297.1	ALDH1A2-008	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558504.1	ALDH1A2-012	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558595.1	ALDH1A2-019	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560923.1	ALDH1A2-022	475	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558603.1	ALDH1A2-007	407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561098.1	ALDH1A2-006	394	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559625.1	ALDH1A2-014	227	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560312.1	ALDH1A2-018	3146	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,098 bps, Translation length: 518 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O94788

CCDS

This transcript is a member of the Human CCDS set: CCDS10163

Version

ENST00000249750.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255869 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000249750.4 ALDH1A2-001

Summary