Transcript: ENST00000392470.2 MASP1-004

Description

mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) [Source:HGNC Symbol;Acc:6901]

Gene Synonyms

3MC1, CRARF, CRARF1, MAP1, MASP, MASP3, MAp44, PRSS5, RaRF

Location

Chromosome 3: 186,964,947-187,009,670 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 19006 variant alleles and maps to 387 oligo probes.

Gene

This transcript is a product of gene ENSG00000127241.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337774.5	MASP1-001	4407	699aa	ENSP00000336792.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33907	C9JLU5 P48740	NM_001879.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296280.6	MASP1-003	4015	728aa	ENSP00000296280.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33908	C9JLU5 P48740 Q9NSY8	NM_139125.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392472.2	MASP1-005	3900	615aa	ENSP00000376264.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P48740 Q9NSY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000169293.6	MASP1-002	2440	380aa	ENSP00000169293.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33909	C9JLU5 F8W876 P48740	NM_001031849.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392470.2	MASP1-004	1673	354aa	ENSP00000376262.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLU5 F8W876	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392475.2	MASP1-007	962	204aa	ENSP00000376267.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLU5 C9JMA2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425937.1	MASP1-010	553	55aa	ENSP00000409047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLU5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000439271.1	MASP1-008	542	118aa	ENSP00000412021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1C7 C9JLU5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000495249.1	MASP1-009	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490558.1	MASP1-013	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465015.1	MASP1-012	510	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468121.1	MASP1-014	498	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480349.1	MASP1-006	5982	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460839.1	MASP1-011	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483719.1	MASP1-015	410	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 1,673 bps, Translation length: 354 residues

Version

ENST00000392470.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000344265 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000392470.2 MASP1-004

Summary